HL_1Z58_057

3D structure

PDB id

1Z58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a complex of the ribosome large subunit with rapamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

UGAAGAAG

Length

8 nucleotides

Bulged bases

1Z58|1|2|G|2508

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1Z58_057 not in the Motif Atlas

Homologous match to HL_7A0S_060

Geometric discrepancy: 0.1535

The information below is about HL_7A0S_060

Detailed Annotation

GNRA variation

Broad Annotation

GNRA variation

Motif group

HL_46665.3

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

12

Unit IDs

1Z58|1|2|U|2507
1Z58|1|2|G|2508
1Z58|1|2|A|2509
1Z58|1|2|A|2510
1Z58|1|2|G|2511
1Z58|1|2|A|2512
1Z58|1|2|A|2513
1Z58|1|2|G|2514

Current chains

Chain 2

23S RIBOSOMAL RNA

Nearby chains