HL_1ZE2_002
3D structure
- PDB id
- 1ZE2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Conformational change of pseudouridine 55 synthase upon its association with RNA substrate
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GU(FHU)CGAAUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: FHU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_1ZE2_002 not in the Motif Atlas
- Geometric match to HL_1ZL3_001
- Geometric discrepancy: 0.2119
- The information below is about HL_1ZL3_001
- Detailed Annotation
- T-loop with unstacked turn
- Broad Annotation
- T-loop
- Motif group
- HL_86012.1
- Basepair signature
- cWW-tWH-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
1ZE2|1|D|G|8
1ZE2|1|D|U|9
1ZE2|1|D|FHU|10
1ZE2|1|D|C|11
1ZE2|1|D|G|12
1ZE2|1|D|A|13
1ZE2|1|D|A|14
1ZE2|1|D|U|15
1ZE2|1|D|C|16
Current chains
- Chain D
- 5'-R(*GP*GP*CP*CP*AP*CP*GP*GP*UP*(FHU)P*CP*GP*AP*AP*UP*CP*CP*GP*UP*GP*GP*C)-3'
Nearby chains
- Chain B
- tRNA pseudouridine synthase B
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