HL_23WI_040
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CUGAAAGCAUCUAAG
- Length
- 15 nucleotides
- Bulged bases
- 23WI|1|5|G|2751, 23WI|1|5|C|2755
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_23WI_040 not in the Motif Atlas
- Homologous match to HL_7A0S_065
- Geometric discrepancy: 0.2457
- The information below is about HL_7A0S_065
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_53269.4
- Basepair signature
- cWW-tWH-tSH-cWH-tSH-tHW-tHW-tSW
- Number of instances in this motif group
- 12
Unit IDs
23WI|1|5|C|2745
23WI|1|5|U|2746
23WI|1|5|G|2747
23WI|1|5|A|2748
23WI|1|5|A|2749
23WI|1|5|A|2750
23WI|1|5|G|2751
23WI|1|5|C|2752
23WI|1|5|A|2753
23WI|1|5|U|2754
23WI|1|5|C|2755
23WI|1|5|U|2756
23WI|1|5|A|2757
23WI|1|5|A|2758
23WI|1|5|G|2759
Current chains
- Chain 5
- RNA (2014-MER)
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain G
- Large ribosomal subunit protein uL6
- Chain J
- 50S ribosomal protein L13
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