HL_23WI_041
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CUUUAAG
- Length
- 7 nucleotides
- Bulged bases
- 23WI|1|5|U|2797, 23WI|1|5|A|2800
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_23WI_041 not in the Motif Atlas
- Geometric match to HL_6VMY_004
- Geometric discrepancy: 0.2927
- The information below is about HL_6VMY_004
- Detailed Annotation
- UNCG variation
- Broad Annotation
- UNCG variation
- Motif group
- HL_34080.1
- Basepair signature
- cWW-cWH-F
- Number of instances in this motif group
- 4
Unit IDs
23WI|1|5|C|2795
23WI|1|5|U|2796
23WI|1|5|U|2797
23WI|1|5|U|2798
23WI|1|5|A|2799
23WI|1|5|A|2800
23WI|1|5|G|2801
Current chains
- Chain 5
- RNA (2014-MER)
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: