HL_23WI_045
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- UGAUAUGAA
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_23WI_045 not in the Motif Atlas
- Geometric match to HL_8B0X_034
- Geometric discrepancy: 0.1585
- The information below is about HL_8B0X_034
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_65821.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
23WI|1|A|U|87
23WI|1|A|G|88
23WI|1|A|A|89
23WI|1|A|U|90
23WI|1|A|A|91
23WI|1|A|U|92
23WI|1|A|G|93
23WI|1|A|A|94
23WI|1|A|A|95
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain T
- 50S ribosomal protein L23
- Chain U
- Large ribosomal subunit protein uL24
- Chain Y
- Large ribosomal subunit protein uL29
Coloring options: