3D structure

PDB id
23WI (explore in PDB, NAKB, or RNA 3D Hub)
Description
Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
Experimental method
ELECTRON MICROSCOPY
Resolution
2.6 Å

Loop

Sequence
UGAAUCCAUAG
Length
11 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

23WI|1|A|U|158
23WI|1|A|G|159
23WI|1|A|A|160
23WI|1|A|A|161
23WI|1|A|U|162
23WI|1|A|C|163
23WI|1|A|C|164
23WI|1|A|A|165
23WI|1|A|U|166
23WI|1|A|A|167
23WI|1|A|G|168

Current chains

Chain A
16S rRNA

Nearby chains

Chain 5
Large subunit ribosomal RNA; LSU rRNA
Chain X
50S ribosomal protein L28

Coloring options:

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