HL_23WI_053
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GUGACAGCC
- Length
- 9 nucleotides
- Bulged bases
- 23WI|1|A|G|329, 23WI|1|A|A|330, 23WI|1|A|C|331
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_23WI_053 not in the Motif Atlas
- Homologous match to HL_7A0S_012
- Geometric discrepancy: 0.3608
- The information below is about HL_7A0S_012
- Detailed Annotation
- T-loop with unstacked turn
- Broad Annotation
- T-loop
- Motif group
- HL_27670.6
- Basepair signature
- cWW-tWH-F-F
- Number of instances in this motif group
- 17
Unit IDs
23WI|1|A|G|327
23WI|1|A|U|328
23WI|1|A|G|329
23WI|1|A|A|330
23WI|1|A|C|331
23WI|1|A|A|332
23WI|1|A|G|333
23WI|1|A|C|334
23WI|1|A|C|335
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain E
- 50S ribosomal protein L4
- Chain U
- Large ribosomal subunit protein uL24
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