HL_23WI_084
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CGGUGAAAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_23WI_084 not in the Motif Atlas
- Homologous match to HL_6CZR_086
- Geometric discrepancy: 0.1227
- The information below is about HL_6CZR_086
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.4
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
23WI|1|a|C|689
23WI|1|a|G|690
23WI|1|a|G|691
23WI|1|a|U|692
23WI|1|a|G|693
23WI|1|a|A|694
23WI|1|a|A|695
23WI|1|a|A|696
23WI|1|a|U|697
23WI|1|a|G|698
Current chains
- Chain a
- RNA (1539-MER)
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain g
- Small ribosomal subunit protein uS7
- Chain k
- Small ribosomal subunit protein uS11
- Chain u
- Small ribosomal subunit protein bS21
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