HL_23WI_099

3D structure

PDB id

23WI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

23WI|1|a|U|1451, 23WI|1|a|C|1452

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_23WI_099 not in the Motif Atlas

Geometric match to HL_5HR7_005

Geometric discrepancy: 0.3127

The information below is about HL_5HR7_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50006.6

Basepair signature

cWW-F-F

Number of instances in this motif group

4

Unit IDs

23WI|1|a|C|1449
23WI|1|a|U|1450
23WI|1|a|U|1451
23WI|1|a|C|1452
23WI|1|a|G|1453
23WI|1|a|G|1454

Current chains

Chain a

RNA (1539-MER)

Nearby chains