HL_28LN_013
3D structure
- PDB id
- 28LN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- XBP1u-stalled RPL4 RNC in complex with NAC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- ACU(PSU)UAA(A2M)UCCUU
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_28LN_013 not in the Motif Atlas
- Homologous match to HL_9PN5_090
- Geometric discrepancy: 0.1632
- The information below is about HL_9PN5_090
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_68749.4
- Basepair signature
- cWW-cWW-F-F-tSH-F-F-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
28LN|1|A2|A|569
28LN|1|A2|C|570
28LN|1|A2|U|571
28LN|1|A2|PSU|572
28LN|1|A2|U|573
28LN|1|A2|A|574
28LN|1|A2|A|575
28LN|1|A2|A2M|576
28LN|1|A2|U|577
28LN|1|A2|C|578
28LN|1|A2|C|579
28LN|1|A2|U|580
28LN|1|A2|U|581
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain AJ
- 40S ribosomal protein S9
- Chain AY
- 40S ribosomal protein S24
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