HL_28LN_018

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

AGGUGAAAU(PSU)

Length

10 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|A2|A|957
28LN|1|A2|G|958
28LN|1|A2|G|959
28LN|1|A2|U|960
28LN|1|A2|G|961
28LN|1|A2|A|962
28LN|1|A2|A|963
28LN|1|A2|A|964
28LN|1|A2|U|965
28LN|1|A2|PSU|966

Current chains

Chain A2

18S rRNA

Nearby chains

Chain AB

40S ribosomal protein S3a

Chain AF

40S ribosomal protein S5

Chain AO

40S ribosomal protein S14

Chain B4

mRNA fragment (6-MER)