HL_28LN_031

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

AUUGCAAUUAU(PSU)

Length

12 nucleotides

Bulged bases

28LN|1|A2|U|1621, 28LN|1|A2|U|1622, 28LN|1|A2|A|1623

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|A2|A|1614
28LN|1|A2|U|1615
28LN|1|A2|U|1616
28LN|1|A2|G|1617
28LN|1|A2|C|1618
28LN|1|A2|A|1619
28LN|1|A2|A|1620
28LN|1|A2|U|1621
28LN|1|A2|U|1622
28LN|1|A2|A|1623
28LN|1|A2|U|1624
28LN|1|A2|PSU|1625

Current chains

Chain A2

18S rRNA

Nearby chains

Chain AP

40S ribosomal protein S15

Chain AS

Small ribosomal subunit protein uS13

Chain AT

Small ribosomal subunit protein eS19

Chain Ad

40S ribosomal protein S29