HL_28ZU_023

3D structure

PDB id

28ZU (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 48S PIC with Kozak mRNA and eIF1A W70A mutant

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GA(PSU)CAGAUACC

Length

11 nucleotides

Bulged bases

28ZU|1|S2|U|1061

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28ZU|1|S2|G|1054
28ZU|1|S2|A|1055
28ZU|1|S2|PSU|1056
28ZU|1|S2|C|1057
28ZU|1|S2|A|1058
28ZU|1|S2|G|1059
28ZU|1|S2|A|1060
28ZU|1|S2|U|1061
28ZU|1|S2|A|1062
28ZU|1|S2|C|1063
28ZU|1|S2|C|1064

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain B

mRNA

Chain D

Eukaryotic translation initiation factor 2 subunit 1

Chain G

Transfer RNA; tRNA

Chain SO

40S ribosomal protein S14

Chain Sa

40S ribosomal protein S26