HL_28ZX_034

3D structure

PDB id

28ZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 48S PIC with mRNA (Kozak_1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

AUUGCAAUUAU(PSU)

Length

12 nucleotides

Bulged bases

28ZX|1|S2|U|1621, 28ZX|1|S2|U|1622, 28ZX|1|S2|A|1623

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28ZX|1|S2|A|1614
28ZX|1|S2|U|1615
28ZX|1|S2|U|1616
28ZX|1|S2|G|1617
28ZX|1|S2|C|1618
28ZX|1|S2|A|1619
28ZX|1|S2|A|1620
28ZX|1|S2|U|1621
28ZX|1|S2|U|1622
28ZX|1|S2|A|1623
28ZX|1|S2|U|1624
28ZX|1|S2|PSU|1625

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SP

40S ribosomal protein S15

Chain SS

40S ribosomal protein S18

Chain ST

Small ribosomal subunit protein eS19

Chain Sd

40S ribosomal protein S29