HL_2AAR_002
3D structure
- PDB id
- 2AAR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of trigger factor binding domain in biologically homologous complex with eubacterial ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- CUGGAGAUACG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_2AAR_002 not in the Motif Atlas
- Homologous match to HL_7A0S_002
- Geometric discrepancy: 0.3251
- The information below is about HL_7A0S_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_76590.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
2AAR|1|0|C|85
2AAR|1|0|U|86
2AAR|1|0|G|87
2AAR|1|0|G|88
2AAR|1|0|A|89
2AAR|1|0|G|90
2AAR|1|0|A|91
2AAR|1|0|U|92
2AAR|1|0|A|93
2AAR|1|0|C|94
2AAR|1|0|G|95
Current chains
- Chain 0
- 23S ribosomal RNA
Nearby chains
- Chain R
- 50S ribosomal protein L23
- Chain W
- 50S ribosomal protein L29
Coloring options: