HL_2AAR_021

3D structure

PDB id

2AAR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of trigger factor binding domain in biologically homologous complex with eubacterial ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CGUGACAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_2AAR_021 not in the Motif Atlas

Geometric match to HL_4V88_194

Geometric discrepancy: 0.3375

The information below is about HL_4V88_194

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50142.3

Basepair signature

cWW-cWW-F-F-F

Number of instances in this motif group

3

Unit IDs

2AAR|1|0|C|725
2AAR|1|0|G|726
2AAR|1|0|U|727
2AAR|1|0|G|728
2AAR|1|0|A|729
2AAR|1|0|C|730
2AAR|1|0|A|731
2AAR|1|0|G|732

Current chains

Chain 0

23S ribosomal RNA

Nearby chains