HL_2AAR_022

3D structure

PDB id

2AAR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of trigger factor binding domain in biologically homologous complex with eubacterial ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

UGCUGAAACA

Length

10 nucleotides

Bulged bases

2AAR|1|0|U|760, 2AAR|1|0|A|764

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_2AAR_022 not in the Motif Atlas

Homologous match to HL_8VTW_022

Geometric discrepancy: 0.3639

The information below is about HL_8VTW_022

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_39334.8

Basepair signature

cWW-cWS-tSW-F-F

Number of instances in this motif group

7

Unit IDs

2AAR|1|0|U|757
2AAR|1|0|G|758
2AAR|1|0|C|759
2AAR|1|0|U|760
2AAR|1|0|G|761
2AAR|1|0|A|762
2AAR|1|0|A|763
2AAR|1|0|A|764
2AAR|1|0|C|765
2AAR|1|0|A|766

Current chains

Chain 0

23S ribosomal RNA

Nearby chains