#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6 71-72-65-7
1 HL_5J7L_1555J7L0.26463DA LSU rRNAU7441MG745PSU746G748A749A750A753cWWtSWcWS
2 HL_7A0S_0227A0S0.20273X LSU rRNAU757G758C759G761A762A763A766cWWtSWcWS
3 HL_4WF9_0234WF90.20783X LSU rRNAC789G790U791G793A794A795G798cWWtSWcWS
4 HL_8VTW_0228VTW0.147531A LSU rRNAG744G745A746G748C749A750C753cWWtSWcWS
5 HL_4V9F_0244V9F0.121130 LSU rRNAU837C838C839A841C842A843A846cWWtSWcWS
6 HL_5TBW_0205TBW0.000031 LSU rRNAA876C877G878G880C881A882U885cWWtSWncWS
7 HL_8C3A_0208C3A0.083231 LSU rRNAA872C873G874G876C877A878U881cWWtSWcWS

3D structures

Complete motif including flanking bases
SequenceCounts
ACGUGCAAAU2
UGAAAAA1
UGCUGAAACA1
CGUUGAAAAG1
GGAUGCAAAC1
UCCUACAAUA1
Non-Watson-Crick part of the motif
SequenceCounts
CGUGCAAA2
(1MG)(PSU)(5MU)GAAAA1
GCUGAAAC1
GUUGAAAA1
GAUGCAAA1
CCUACAAU1

Release history

Release3.883.893.90
Date2024-09-112024-10-092024-11-06
StatusUpdated, 1 parentExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (7)
  • Basepair signature
    cWW-cWS-tSW-F-F
    Heat map statistics
    Min 0.08 | Avg 0.18 | Max 0.33
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