HL_2AAR_044

3D structure

PDB id

2AAR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of trigger factor binding domain in biologically homologous complex with eubacterial ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GUUUACCAAAAUC

Length

13 nucleotides

Bulged bases

2AAR|1|0|A|1771, 2AAR|1|0|C|1772, 2AAR|1|0|C|1773, 2AAR|1|0|A|1777

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_2AAR_044 not in the Motif Atlas

Homologous match to HL_7A0S_045

Geometric discrepancy: 0.1719

The information below is about HL_7A0S_045

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50951.2

Basepair signature

cWW-F-F-tWH-F-F-F

Number of instances in this motif group

6

Unit IDs

2AAR|1|0|G|1767
2AAR|1|0|U|1768
2AAR|1|0|U|1769
2AAR|1|0|U|1770
2AAR|1|0|A|1771
2AAR|1|0|C|1772
2AAR|1|0|C|1773
2AAR|1|0|A|1774
2AAR|1|0|A|1775
2AAR|1|0|A|1776
2AAR|1|0|A|1777
2AAR|1|0|U|1778
2AAR|1|0|C|1779

Current chains

Chain 0

23S ribosomal RNA

Nearby chains