HL_2AAR_053

3D structure

PDB id

2AAR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of trigger factor binding domain in biologically homologous complex with eubacterial ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GGUUGGAAAUC

Length

11 nucleotides

Bulged bases

2AAR|1|0|U|2285

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_2AAR_053 not in the Motif Atlas

Geometric match to HL_8KAH_003

Geometric discrepancy: 0.3012

The information below is about HL_8KAH_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89457.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

2

Unit IDs

2AAR|1|0|G|2282
2AAR|1|0|G|2283
2AAR|1|0|U|2284
2AAR|1|0|U|2285
2AAR|1|0|G|2286
2AAR|1|0|G|2287
2AAR|1|0|A|2288
2AAR|1|0|A|2289
2AAR|1|0|A|2290
2AAR|1|0|U|2291
2AAR|1|0|C|2292

Current chains

Chain 0

23S ribosomal RNA

Nearby chains