HL_2ANR_001
3D structure
- PDB id
- 2ANR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure (II) of Nova-1 KH1/KH2 domain tandem with 25nt RNA hairpin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 1.94 Å
Loop
- Sequence
- CGGAUCAGUCACCCAAG
- Length
- 17 nucleotides
- Bulged bases
- 2ANR|1|B|U|213
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_2ANR_001 not in the Motif Atlas
- Geometric match to HL_2ANN_001
- Geometric discrepancy: 0.0558
- The information below is about HL_2ANN_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_89498.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
2ANR|1|B|C|205
2ANR|1|B|G|206
2ANR|1|B|G|207
2ANR|1|B|A|208
2ANR|1|B|U|209
2ANR|1|B|C|210
2ANR|1|B|A|211
2ANR|1|B|G|212
2ANR|1|B|U|213
2ANR|1|B|C|214
2ANR|1|B|A|215
2ANR|1|B|C|216
2ANR|1|B|C|217
2ANR|1|B|C|218
2ANR|1|B|A|219
2ANR|1|B|A|220
2ANR|1|B|G|221
Current chains
- Chain B
- 5'-R(*CP*(5BU)P*CP*GP*CP*GP*GP*AP*UP*CP*AP*GP*UP*CP*AP*CP*CP*CP*AP*AP*GP*CP*GP*AP*G)-3'
Nearby chains
- Chain A
- neuro-oncological ventral antigen 1
Coloring options: