HL_2CV0_001

3D structure

PDB id

2CV0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Glutamyl-tRNA synthetase from Thermus thermophilus in complex with tRNA(Glu) and L-glutamate

Experimental method

X-RAY DIFFRACTION

Resolution

2.4 Å

Loop

Sequence

UAGCGGUUAG

Length

10 nucleotides

Bulged bases

2CV0|1|C|C|516, 2CV0|1|C|G|518, 2CV0|1|C|G|519, 2CV0|1|C|U|520|||A

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_2CV0_001 not in the Motif Atlas

Geometric match to HL_1N78_001

Geometric discrepancy: 0.0376

The information below is about HL_1N78_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_78347.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

8

Unit IDs

2CV0|1|C|U|513
2CV0|1|C|A|514
2CV0|1|C|G|515
2CV0|1|C|C|516
2CV0|1|C|G|518
2CV0|1|C|G|519
2CV0|1|C|U|520
2CV0|1|C|U|520|||A
2CV0|1|C|A|521
2CV0|1|C|G|522

Current chains

Chain C

tRNA

Nearby chains

Chain A

glutamyl-tRNA synthetase