HL_2D6F_005

3D structure

PDB id

2D6F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Glu-tRNA(Gln) amidotransferase in the complex with tRNA(Gln)

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

GCUUUGGAC

Length

9 nucleotides

Bulged bases

2D6F|1|F|U|934, 2D6F|1|F|U|935

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

tRNA anticodon loop

Broad Annotation

Anticodon loop

Motif group

HL_77436.5

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

2D6F|1|F|G|931
2D6F|1|F|C|932
2D6F|1|F|U|933
2D6F|1|F|U|934
2D6F|1|F|U|935
2D6F|1|F|G|936
2D6F|1|F|G|937
2D6F|1|F|A|938
2D6F|1|F|C|939

Current chains

Chain F

tRNA

Nearby chains