HL_2JL6_050

3D structure

PDB id

2JL6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Insights into translational termination from the structure of RF2 bound to the ribosome (part 2 of 4).This file contains the 50s subunit.

Experimental method

X-RAY DIFFRACTION

Resolution

3.45 Å

Loop

Sequence

GUAACUAUAAC

Length

11 nucleotides

Bulged bases

2JL6|1|A|A|1913

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_2JL6_050 not in the Motif Atlas

Geometric match to HL_5TBW_049

Geometric discrepancy: 0.1167

The information below is about HL_5TBW_049

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_84702.1

Basepair signature

cWW-F-F-tHW-F-F-F-F

Number of instances in this motif group

4

Unit IDs

2JL6|1|A|G|1910
2JL6|1|A|U|1911
2JL6|1|A|A|1912
2JL6|1|A|A|1913
2JL6|1|A|C|1914
2JL6|1|A|U|1915
2JL6|1|A|A|1916
2JL6|1|A|U|1917
2JL6|1|A|A|1918
2JL6|1|A|A|1919
2JL6|1|A|C|1920

Current chains

Chain A

23S RIBOSOMAL RNA

Nearby chains