HL_2JL6_067

3D structure

PDB id

2JL6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Insights into translational termination from the structure of RF2 bound to the ribosome (part 2 of 4).This file contains the 50s subunit.

Experimental method

X-RAY DIFFRACTION

Resolution

3.45 Å

Loop

Sequence

CUCCAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_2JL6_067 not in the Motif Atlas

Geometric match to HL_5TBW_022

Geometric discrepancy: 0.3104

The information below is about HL_5TBW_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

2JL6|1|A|C|2701
2JL6|1|A|U|2702
2JL6|1|A|C|2703
2JL6|1|A|C|2704
2JL6|1|A|A|2705
2JL6|1|A|G|2706

Current chains

Chain A

23S RIBOSOMAL RNA

Nearby chains

Chain R

50S RIBOSOMAL PROTEIN L17