HL_2QBG_028

3D structure

PDB id

2QBG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF). This file contains the 50S subunit of the second 70S ribosome, with RRF bound. The entire crystal structure contains two 70S ribosomes and is described in remark 400.

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

UGCUAACG

Length

8 nucleotides

Bulged bases

2QBG|1|B|U|958, 2QBG|1|B|C|961

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_67042.17

Basepair signature

cWW-tSH-R-R

Number of instances in this motif group

328

Unit IDs

2QBG|1|B|U|955
2QBG|1|B|G|956
2QBG|1|B|C|957
2QBG|1|B|U|958
2QBG|1|B|A|959
2QBG|1|B|A|960
2QBG|1|B|C|961
2QBG|1|B|G|962

Current chains

Chain B

23S rRNA

Nearby chains

Chain A

5S rRNA

Chain M

50S ribosomal protein L16