HL_2QBG_037

3D structure

PDB id

2QBG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF). This file contains the 50S subunit of the second 70S ribosome, with RRF bound. The entire crystal structure contains two 70S ribosomes and is described in remark 400.

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

2QBG|1|B|U|1396, 2QBG|1|B|U|1397

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_24544.6

Basepair signature

cWW-tWH-R-tSH-R

Number of instances in this motif group

11

Unit IDs

2QBG|1|B|G|1389
2QBG|1|B|U|1390
2QBG|1|B|U|1391
2QBG|1|B|A|1392
2QBG|1|B|A|1393
2QBG|1|B|U|1394
2QBG|1|B|A|1395
2QBG|1|B|U|1396
2QBG|1|B|U|1397
2QBG|1|B|C|1398

Current chains

Chain B

23S rRNA

Nearby chains

Chain T

50S ribosomal protein L23