HL_2UUA_017
3D structure
- PDB id
- 2UUA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUC-codon in the A-site and paromomycin.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 2UUA|1|A|U|793
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_2UUA_017 not in the Motif Atlas
- Homologous match to HL_4LFB_017
- Geometric discrepancy: 0.0621
- The information below is about HL_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
2UUA|1|A|G|786
2UUA|1|A|A|787
2UUA|1|A|U|788
2UUA|1|A|U|789
2UUA|1|A|A|790
2UUA|1|A|G|791
2UUA|1|A|A|792
2UUA|1|A|U|793
2UUA|1|A|A|794
2UUA|1|A|C|795
2UUA|1|A|C|796
Current chains
- Chain A
- 16S RRNA
Nearby chains
- Chain K
- 30S RIBOSOMAL PROTEIN S11
Coloring options: