HL_2UXC_021
3D structure
- PDB id
- 2UXC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of an extended tRNA anticodon stem loop in complex with its cognate mRNA UCGU in the context of the Thermus thermophilus 30S subunit.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GAAGCAACGC
- Length
- 10 nucleotides
- Bulged bases
- 2UXC|1|A|G|971
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_2UXC_021 not in the Motif Atlas
- Homologous match to HL_4LFB_021
- Geometric discrepancy: 0.1137
- The information below is about HL_4LFB_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97521.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
2UXC|1|A|G|963
2UXC|1|A|A|964
2UXC|1|A|A|965
2UXC|1|A|G|966
2UXC|1|A|C|967
2UXC|1|A|A|968
2UXC|1|A|A|969
2UXC|1|A|C|970
2UXC|1|A|G|971
2UXC|1|A|C|972
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain I
- RIBOSOMAL PROTEIN S9
- Chain J
- RIBOSOMAL PROTEIN S10
- Chain M
- RIBOSOMAL PROTEIN S13
- Chain N
- RIBOSOMAL PROTEIN S14
Coloring options: