HL_2UXD_025
3D structure
- PDB id
- 2UXD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of an extended tRNA anticodon stem loop in complex with its cognate mRNA CGGG in the context of the Thermus thermophilus 30S subunit.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GUUAAGUC
- Length
- 8 nucleotides
- Bulged bases
- 2UXD|1|A|G|1094
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_2UXD_025 not in the Motif Atlas
- Homologous match to HL_5J7L_024
- Geometric discrepancy: 0.1236
- The information below is about HL_5J7L_024
- Detailed Annotation
- T-loop related
- Broad Annotation
- T-loop
- Motif group
- HL_77436.5
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 23
Unit IDs
2UXD|1|A|G|1089
2UXD|1|A|U|1090
2UXD|1|A|U|1091
2UXD|1|A|A|1092
2UXD|1|A|A|1093
2UXD|1|A|G|1094
2UXD|1|A|U|1095
2UXD|1|A|C|1096
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain B
- RIBOSOMAL PROTEIN S2
- Chain G
- RIBOSOMAL PROTEIN S7
Coloring options: