HL_3BBX_027
3D structure
- PDB id
- 3BBX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 10 Å
Loop
- Sequence
- UGCUAACG
- Length
- 8 nucleotides
- Bulged bases
- 3BBX|1|B|U|958, 3BBX|1|B|C|961
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3BBX_027 not in the Motif Atlas
- Homologous match to HL_4WF9_027
- Geometric discrepancy: 0.1473
- The information below is about HL_4WF9_027
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.8
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 352
Unit IDs
3BBX|1|B|U|955
3BBX|1|B|G|956
3BBX|1|B|C|957
3BBX|1|B|U|958
3BBX|1|B|A|959
3BBX|1|B|A|960
3BBX|1|B|C|961
3BBX|1|B|G|962
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain A
- 5S ribosomal RNA; 5S rRNA
- Chain M
- 50S ribosomal protein L16
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