HL_3BBX_029

3D structure

PDB id

3BBX (explore in PDB, NAKB, or RNA 3D Hub)

Description

The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

10 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

3BBX|1|B|A|1070

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3BBX_029 not in the Motif Atlas

Homologous match to HL_6PRV_001

Geometric discrepancy: 0.0947

The information below is about HL_6PRV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19210.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

3BBX|1|B|C|1064
3BBX|1|B|U|1065
3BBX|1|B|U|1066
3BBX|1|B|A|1067
3BBX|1|B|G|1068
3BBX|1|B|A|1069
3BBX|1|B|A|1070
3BBX|1|B|G|1071
3BBX|1|B|C|1072
3BBX|1|B|A|1073
3BBX|1|B|G|1074

Current chains

Chain B

23S ribosomal RNA

Nearby chains