HL_3BBX_049

3D structure

PDB id

3BBX (explore in PDB, NAKB, or RNA 3D Hub)

Description

The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

10 Å

Loop

Sequence

GUAACUAUAAC

Length

11 nucleotides

Bulged bases

3BBX|1|B|A|1913

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3BBX_049 not in the Motif Atlas

Geometric match to HL_5TBW_049

Geometric discrepancy: 0.2102

The information below is about HL_5TBW_049

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_84702.1

Basepair signature

cWW-F-F-tHW-F-F-F-F

Number of instances in this motif group

4

Unit IDs

3BBX|1|B|G|1910
3BBX|1|B|U|1911
3BBX|1|B|A|1912
3BBX|1|B|A|1913
3BBX|1|B|C|1914
3BBX|1|B|U|1915
3BBX|1|B|A|1916
3BBX|1|B|U|1917
3BBX|1|B|A|1918
3BBX|1|B|A|1919
3BBX|1|B|C|1920

Current chains

Chain B

23S ribosomal RNA

Nearby chains