HL_3BBX_068

3D structure

PDB id

3BBX (explore in PDB, NAKB, or RNA 3D Hub)

Description

The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

10 Å

Loop

Sequence

UUUAA

Length

5 nucleotides

Bulged bases

3BBX|1|B|U|2797, 3BBX|1|B|A|2799

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3BBX_068 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.2445

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

3BBX|1|B|U|2796
3BBX|1|B|U|2797
3BBX|1|B|U|2798
3BBX|1|B|A|2799
3BBX|1|B|A|2800

Current chains

Chain B

23S ribosomal RNA

Nearby chains