HL_3CCL_031

3D structure

PDB id

3CCL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation U2535C. Density for Anisomycin is visible but not included in model.

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CGUAACAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3CCL_031 not in the Motif Atlas

Homologous match to HL_5D8H_002

Geometric discrepancy: 0.1423

The information below is about HL_5D8H_002

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_98423.3

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

15

Unit IDs

3CCL|1|0|C|1196
3CCL|1|0|G|1197
3CCL|1|0|U|1198
3CCL|1|0|A|1199
3CCL|1|0|A|1200
3CCL|1|0|C|1201
3CCL|1|0|A|1202
3CCL|1|0|G|1203

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains