HL_3CXC_031

3D structure

PDB id

3CXC (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of an enhanced oxazolidinone inhibitor bound to the 50S ribosomal subunit of H. marismortui

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGUAACAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3CXC_031 not in the Motif Atlas

Homologous match to HL_5D8H_002

Geometric discrepancy: 0.125

The information below is about HL_5D8H_002

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_98423.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

12

Unit IDs

3CXC|1|0|C|1196
3CXC|1|0|G|1197
3CXC|1|0|U|1198
3CXC|1|0|A|1199
3CXC|1|0|A|1200
3CXC|1|0|C|1201
3CXC|1|0|A|1202
3CXC|1|0|G|1203

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains