3D structure

PDB id
3DHS (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mapping metal-binding sites in the catalytic domain of bacterial RNase P RNA
Experimental method
X-RAY DIFFRACTION
Resolution
3.6 Å

Loop

Sequence
GGAAAUGAAC
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_20843.1
Basepair signature
cWW-tSH-tHW-R-R-R-R
Number of instances in this motif group
2

Unit IDs

3DHS|1|A|G|288
3DHS|1|A|G|289
3DHS|1|A|A|290
3DHS|1|A|A|291
3DHS|1|A|A|292
3DHS|1|A|U|293
3DHS|1|A|G|294
3DHS|1|A|A|295
3DHS|1|A|A|296
3DHS|1|A|C|297

Current chains

Chain A
RNase P RNA

Nearby chains

No other chains within 10Å

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.0792 s