3D structure

PDB id
3IGI (explore in PDB, NAKB, or RNA 3D Hub)
Description
Tertiary Architecture of the Oceanobacillus Iheyensis Group II Intron
Experimental method
X-RAY DIFFRACTION
Resolution
3.12 Å

Loop

Sequence
CGAACG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_22584.3
Basepair signature
cWW-tWS-cWW-F
Number of instances in this motif group
22

Unit IDs

3IGI|1|A|C|368
3IGI|1|A|G|369
3IGI|1|A|A|370
3IGI|1|A|A|371
3IGI|1|A|C|372
3IGI|1|A|G|373

Current chains

Chain A
Group IIC intron

Nearby chains

Chain B
5'-R(*CP*GP*CP*UP*CP*UP*AP*CP*UP*CP*UP*AP*U)-3'

Coloring options:

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