HL_3J6B_013
3D structure
- PDB id
- 3J6B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial large ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- AAAAAAAUAU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3J6B_013 not in the Motif Atlas
- Geometric match to HL_4TUE_219
- Geometric discrepancy: 0.3681
- The information below is about HL_4TUE_219
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
3J6B|1|A|A|542
3J6B|1|A|A|543
3J6B|1|A|A|544
3J6B|1|A|A|545
3J6B|1|A|A|546
3J6B|1|A|A|547
3J6B|1|A|A|548
3J6B|1|A|U|549
3J6B|1|A|A|550
3J6B|1|A|U|551
Current chains
- Chain A
- 21S ribosomal RNA
Nearby chains
- Chain 1
- 54S ribosomal protein L35, mitochondrial
- Chain J
- 54S ribosomal protein L10, mitochondrial
- Chain R
- 54S ribosomal protein L2, mitochondrial
- Chain X
- 54S ribosomal protein L39, mitochondrial
- Chain Z
- mitochondrial ribosomal protein YNL122C
Coloring options: