HL_3J6B_015
3D structure
- PDB id
- 3J6B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial large ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UGUUGCAAUA
- Length
- 10 nucleotides
- Bulged bases
- 3J6B|1|A|U|638, 3J6B|1|A|A|642, 3J6B|1|A|U|643
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3J6B_015 not in the Motif Atlas
- Homologous match to HL_7RQB_023
- Geometric discrepancy: 0.1374
- The information below is about HL_7RQB_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_39334.6
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 6
Unit IDs
3J6B|1|A|U|635
3J6B|1|A|G|636
3J6B|1|A|U|637
3J6B|1|A|U|638
3J6B|1|A|G|639
3J6B|1|A|C|640
3J6B|1|A|A|641
3J6B|1|A|A|642
3J6B|1|A|U|643
3J6B|1|A|A|644
Current chains
- Chain A
- 21S ribosomal RNA
Nearby chains
- Chain C
- 54S ribosomal protein L9, mitochondrial
- Chain O
- 54S ribosomal protein L22, mitochondrial
- Chain W
- 54S ribosomal protein L32, mitochondrial
- Chain Y
- 54S ribosomal protein L34, mitochondrial
Coloring options: