HL_3J6B_032
3D structure
- PDB id
- 3J6B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial large ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UUUACUAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 3J6B|1|A|A|1687, 3J6B|1|A|C|1688, 3J6B|1|A|U|1689, 3J6B|1|A|A|1693
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3J6B_032 not in the Motif Atlas
- Homologous match to HL_4WF9_043
- Geometric discrepancy: 0.0762
- The information below is about HL_4WF9_043
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_01962.2
- Basepair signature
- cWW-tWH-tWH-F
- Number of instances in this motif group
- 6
Unit IDs
3J6B|1|A|U|1684
3J6B|1|A|U|1685
3J6B|1|A|U|1686
3J6B|1|A|A|1687
3J6B|1|A|C|1688
3J6B|1|A|U|1689
3J6B|1|A|A|1690
3J6B|1|A|A|1691
3J6B|1|A|A|1692
3J6B|1|A|A|1693
3J6B|1|A|A|1694
Current chains
- Chain A
- 21S ribosomal RNA
Nearby chains
- Chain B
- 54S ribosomal protein RML2, mitochondrial
- Chain Y
- 54S ribosomal protein L34, mitochondrial
Coloring options: