HL_3J73_017
3D structure
- PDB id
- 3J73 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the translating mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CCUCUCCAGUCCG
- Length
- 13 nucleotides
- Bulged bases
- 3J73|1|5|C|1439
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3J73_017 not in the Motif Atlas
- Homologous match to HL_8GLP_020
- Geometric discrepancy: 0.5031
- The information below is about HL_8GLP_020
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_20751.3
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
3J73|1|5|C|1436
3J73|1|5|C|1437
3J73|1|5|U|1438
3J73|1|5|C|1439
3J73|1|5|U|1440
3J73|1|5|C|1441
3J73|1|5|C|1442
3J73|1|5|A|1443
3J73|1|5|G|1444
3J73|1|5|U|1445
3J73|1|5|C|1446
3J73|1|5|C|1447
3J73|1|5|G|1448
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain C
- Ribosomal protein uL4
- Chain F
- Ribosomal protein uL30
- Chain Q
- Ribosomal protein eL18
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