HL_3J74_046
3D structure
- PDB id
- 3J74 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 80S mammalian ribosome bound to eEF2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UUUAAUUAAAA
- Length
- 11 nucleotides
- Bulged bases
- 3J74|1|5|A|3642, 3J74|1|5|A|3643, 3J74|1|5|U|3644, 3J74|1|5|A|3648
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3J74_046 not in the Motif Atlas
- Geometric match to HL_4WF9_043
- Geometric discrepancy: 0.1642
- The information below is about HL_4WF9_043
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87681.2
- Basepair signature
- cWW-tWH-tWH-F
- Number of instances in this motif group
- 10
Unit IDs
3J74|1|5|U|3639
3J74|1|5|U|3640
3J74|1|5|U|3641
3J74|1|5|A|3642
3J74|1|5|A|3643
3J74|1|5|U|3644
3J74|1|5|U|3645
3J74|1|5|A|3646
3J74|1|5|A|3647
3J74|1|5|A|3648
3J74|1|5|A|3649
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain A
- Ribosomal protein uL12
- Chain j
- Ribosomal protein eL37
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