HL_3J74_094
3D structure
- PDB id
- 3J74 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 80S mammalian ribosome bound to eEF2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UAUUUUGUUGGUUUUCG
- Length
- 17 nucleotides
- Bulged bases
- 3J74|1|S2|U|890
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3J74_094 not in the Motif Atlas
- Geometric match to HL_6UFM_001
- Geometric discrepancy: 0.3852
- The information below is about HL_6UFM_001
- Detailed Annotation
- tRNA D-loop
- Broad Annotation
- No text annotation
- Motif group
- HL_04642.3
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
3J74|1|S2|U|885
3J74|1|S2|A|886
3J74|1|S2|U|887
3J74|1|S2|U|888
3J74|1|S2|U|889
3J74|1|S2|U|890
3J74|1|S2|G|891
3J74|1|S2|U|892
3J74|1|S2|U|893
3J74|1|S2|G|894
3J74|1|S2|G|895
3J74|1|S2|U|896
3J74|1|S2|U|897
3J74|1|S2|U|898
3J74|1|S2|U|899
3J74|1|S2|C|900
3J74|1|S2|G|901
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SL
- Ribosomal protein uS17
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