HL_3J74_103

3D structure

PDB id

3J74 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CGUUCAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3J74_103 not in the Motif Atlas

Geometric match to HL_1F1T_001

Geometric discrepancy: 0.3063

The information below is about HL_1F1T_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_59843.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

2

Unit IDs

3J74|1|S2|C|1460
3J74|1|S2|G|1461
3J74|1|S2|U|1462
3J74|1|S2|U|1463
3J74|1|S2|C|1464
3J74|1|S2|A|1465
3J74|1|S2|G|1466

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SR

Ribosomal protein eS17

Chain Sc

Ribosomal protein eS28