HL_3J77_086
3D structure
- PDB id
- 3J77 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.2 Å
Loop
- Sequence
- UCUAAUUAG
- Length
- 9 nucleotides
- Bulged bases
- 3J77|1|2S|U|2298
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3J77_086 not in the Motif Atlas
- Homologous match to HL_5TBW_050
- Geometric discrepancy: 0.1476
- The information below is about HL_5TBW_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_27115.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 22
Unit IDs
3J77|1|2S|U|2292
3J77|1|2S|C|2293
3J77|1|2S|U|2294
3J77|1|2S|A|2295
3J77|1|2S|A|2296
3J77|1|2S|U|2297
3J77|1|2S|U|2298
3J77|1|2S|A|2299
3J77|1|2S|G|2300
Current chains
- Chain 2S
- 25S ribosomal RNA
Nearby chains
- Chain 1S
- Small subunit ribosomal RNA; SSU rRNA
- Chain 73
- 60S ribosomal protein L23
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