HL_3J79_005
3D structure
- PDB id
- 3J79 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, large subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CAGGAAUG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_68864.1
- Basepair signature
- cWW-tWH-R-R-R
- Number of instances in this motif group
- 24
Unit IDs
3J79|1|A|C|202
3J79|1|A|A|203
3J79|1|A|G|204
3J79|1|A|G|205
3J79|1|A|A|206
3J79|1|A|A|207
3J79|1|A|U|208
3J79|1|A|G|209
Current chains
- Chain A
- 28S ribosomal RNA
Nearby chains
- Chain 8
- 60S ribosomal protein eL32
- Chain F
- 60S ribosomal protein uL4
- Chain Z
- 60S ribosomal protein uL24
Coloring options: