HL_3J7P_025

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UGGUAAGCA

Length

9 nucleotides

Bulged bases

3J7P|1|5|G|1869

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_79306.1

Basepair signature

cWW-bif-R-tSH-R

Number of instances in this motif group

20

Unit IDs

3J7P|1|5|U|1863
3J7P|1|5|G|1864
3J7P|1|5|G|1865
3J7P|1|5|U|1866
3J7P|1|5|A|1867
3J7P|1|5|A|1868
3J7P|1|5|G|1869
3J7P|1|5|C|1870
3J7P|1|5|A|1871

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain I

Ribosomal protein uL16

Chain b

Ribosomal protein eL29