HL_3J7P_038

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AGUUCUCUUUU

Length

11 nucleotides

Bulged bases

3J7P|1|5|U|2631

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_22130.1

Basepair signature

cWW-cWW-R-R-R-R-R

Number of instances in this motif group

7

Unit IDs

3J7P|1|5|A|2623
3J7P|1|5|G|2624
3J7P|1|5|U|2625
3J7P|1|5|U|2626
3J7P|1|5|C|2627
3J7P|1|5|U|2628
3J7P|1|5|C|2629
3J7P|1|5|U|2630
3J7P|1|5|U|2631
3J7P|1|5|U|2632
3J7P|1|5|U|2633

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain R

Ribosomal protein eL19

Chain U

Ribosomal protein eL22