HL_3J7P_056

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UCAAACGGUAACG

Length

13 nucleotides

Bulged bases

3J7P|1|5|A|4214, 3J7P|1|5|C|4221

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_38117.1

Basepair signature

cWW-tSH-tHH-tWW-R-R-R

Number of instances in this motif group

15

Unit IDs

3J7P|1|5|U|4210
3J7P|1|5|C|4211
3J7P|1|5|A|4212
3J7P|1|5|A|4213
3J7P|1|5|A|4214
3J7P|1|5|C|4215
3J7P|1|5|G|4216
3J7P|1|5|G|4217
3J7P|1|5|U|4218
3J7P|1|5|A|4219
3J7P|1|5|A|4220
3J7P|1|5|C|4221
3J7P|1|5|G|4222

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain I

Ribosomal protein uL16

Chain T

Ribosomal protein eL21

Chain b

Ribosomal protein eL29